The SVAP online assemble tool reads four kinds of data format: FASTA, GFF, PSL and ECS. If you do not known what we are talking about, please refer to our DATA FORMAT GUIDE.

Users need to known that the PSL format gives less information than FASTA, GFF and ECS, such as if the transcripts has stand splice sites, length of polyA tail and reliable polyA signal, etc. And GFF and ECS can also takes transcript's expression tissue and organ information, which is useful for the isoform analysis.

To start your assemble task, click here. The assemble tool will assign you a Task ID which is unique. You can use it to access your results at Data Retrival Page.

NOTES: Since SVAP is focus on analysis of a gene cluster's variant event, users should make sure that their input transcripts come from a same chromosome. To access the full fuctions of SVAP, users need to endable javascripts in their web browser.